UNM CS-591 Section 008
Monday & Wednesday, 1:00-2:15 pm
Dane Smith Hall, Room 232
Reading List
- S. Lansing “Complex adaptive systems”
http://www.cs.unm.edu/~forrest/cas-class/readings-2006/lansing-complex-adaptive-systems.pdf - S. Levin “Complex adaptive systems: Exploring the known,
the unknown, and the unknowable”
http://www.cs.unm.edu/~forrest/cas-class/readings-2006/Levin-complex-adaptive-systems.pdf - The Origin of Species
http://www.literature.org/authors/darwin-charles/the-origin-of-species/chapter-01.html
http://www.literature.org/authors/darwin-charles/the-origin-of-species/chapter-02.html
http://www.literature.org/authors/darwin-charles/the-origin-of-species/chapter-03.html - Y. Sato et al. ”Chaos in learning a simple two-person game”
http://www.cs.unm.edu/~forrest/cas-class/readings-2006/chaosinlearning.pdf - Smith et al. Major Transitions in Evolution, Ch. 1
- M. Nowak and K. Sigmund “Bacterial game dynamics”
http://www.cs.unm.edu/~forrest/cas-class/readings-2006/nowak-bacterial-games.pdf - B. Kerr et al. “Local dispersal promoted biodiversity in real-life
game of rock-paper-scissors”
http://www.cs.unm.edu/~forrest/cas-class/readings-2006/feldman-rock-scissors-paper.pdf - Hanahan, "Hallmarks of Cancer"
http://www.cs.unm.edu/~forrest/cas-class/readings-2006/Hanahan.pdf - Abbott et al, "Simulating the Hallmarks of Cancer"
http://www.cs.unm.edu/~forrest/cas-class/readings-2006/abbott.pdf - Gerety et al. "Modeling somatic evolution in tumorigenesis"
http://www.cs.unm.edu/~forrest/cas-class/readings-2006/paper_plos_submitted.pdf - Durrett and Levin, "The Importance of Being Discrete (and
Spatial)"
http://www.cs.unm.edu/~forrest/cas-class/readings-2006/Durrent-Levin-1994.pdf - Forrest et al, "Architecture for an Artificial Immune System"
http://cs.unm.edu/~forrest/publications/hofmeyr_forrest.pdf - Esponda et al. "Negative Representations of Information"
http://www.cs.unm.edu/~forrest/cas-class/readings-2006/negdb-draft.pdf - Somayaji and Forrest, "Automated response using system call
delays"
http://cs.unm.edu/~forrest/publications/uss-2000.pdf - Barrantes et al. "Randomized instruction set emulation"
http://www.cs.unm.edu/~forrest/publications/rise-tissec.pdf - Balthrop et al. "Technological networks and the spread of
computer viruses"
http://www.sciencemag.org/cgi/content/full/304/5670/527?ijk... - Smith et al, "Variable efficacy of repeated annual influenza
vaccination"
http://www.cs.unm.edu/~forrest/cas-class/readings-2006/variable-efficacy-PNAS.pdf - Beauchemin, "Probing the Effects of the Well-mixed Assumption
on Viral Infection Dynamics"
http://www.cs.unm.edu/~forrest/cas-class/readings-2006/beauchemin-flu.pdf - Chao et al. "The effects of thymic selection on the range
of T cell cross-reactivity"
http://www.cs.unm.edu/~forrest/publications/chao-repertoire-05.pdf
PAPER COPY ONLY:
- Maynard-Smith readings
- An interpretative introduction to the immune system
- Directed Graph Epidemiology